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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1797KEGG: pca:Pcar_2434 hypothetical protein. (175 aa)    
Predicted Functional Partners:
Swol_0526
KEGG: dsy:DSY1893 hypothetical protein.
  
     0.597
Swol_0317
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.581
Swol_0293
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.565
Swol_2165
KEGG: tte:TTE0834 hypothetical protein.
  
     0.553
Swol_1096
Hypothetical protein; KEGG: mta:Moth_2139 beta-mannanase-like; Belongs to the glycosyl hydrolase 26 family.
  
     0.539
Swol_1798
KEGG: mta:Moth_2145 hypothetical protein.
 
     0.530
Swol_1796
Hypothetical protein; KEGG: mhu:Mhun_3235 anti-sigma-factor antagonist (STAS) domain protein.
 
     0.526
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.517
Swol_0141
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.503
Swol_2188
Hypothetical protein.
  
     0.493
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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