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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1815KEGG: dde:Dde_3546 xanthine dehydrogenase accessory factor. (60 aa)    
Predicted Functional Partners:
Swol_1814
KEGG: pca:Pcar_0227 hypothetical protein.
     0.970
Swol_1816
KEGG: dsy:DSY1981 hypothetical protein.
 
  
 0.947
Swol_1819
KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme.
 
  
 0.891
Swol_1817
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; KEGG: bha:BH0748 xanthine dehydrogenase.
 
  
 0.879
Swol_1818
(2Fe-2S)-binding; KEGG: mta:Moth_1961 (2Fe-2S)-binding.
 
  
 0.842
Swol_1820
Na+-driven multidrug efflux pump-like protein; KEGG: bha:BH2163 hypothetical protein.
       0.696
Swol_1137
KEGG: ppr:PBPRA1939 hypothetical dehydrogenase.
 
  
 0.528
Swol_1027
Molybdopterin biosynthesis protein, putative; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.467
Swol_2455
KEGG: sat:SYN_00841 hypothetical cytosolic protein.
  
     0.461
Swol_1813
KEGG: ctc:CTC01205 tRNA nucleotidyltransferase (CCA-adding enzyme).
       0.448
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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