STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1824KEGG: dsy:DSY3100 formate dehydrogenase beta subunit. (270 aa)    
Predicted Functional Partners:
Swol_1825
KEGG: dsy:DSY3101 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.998
Swol_1823
KEGG: dsy:DSY3099 formate dehydrogenase gamma subunit.
 
 0.997
Swol_0799
KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.995
Swol_0800
KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing.
 
 0.995
Swol_0797
KEGG: dsy:DSY3099 formate dehydrogenase gamma subunit.
 
 0.988
Swol_1826
KEGG: dsy:DSY3101 formate dehydrogenase alpha subunit.
 
 
 0.986
Swol_1927
KEGG: son:SO3922 formate dehydrogenase, putative.
 
 0.986
Swol_1822
KEGG: dsy:DSY3098 putative formate dehydrogenase formation protein FdhE.
 
  
 0.939
Swol_1832
KEGG: mag:amb2921 Fe-S-cluster-containing hydrogenase components 2.
 
  
0.932
Swol_0786
KEGG: sth:STH3295 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.930
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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