Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swol_1880KEGG: mta:Moth_2166 putative transcriptional regulator, CopG family. (89 aa)    
Predicted Functional Partners:
Swol_1879
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.976
Swol_1876
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.856
Swol_1444
KEGG: mta:Moth_0580 hypothetical protein.
  
     0.693
Swol_0963
KEGG: tte:TTE1573 hypothetical protein.
  
     0.632
Swol_0249
KEGG: chy:CHY_0171 hypothetical protein.
 
    0.594
Swol_1175
Hypothetical protein.
  
     0.589
Swol_1881
Hypothetical protein; KEGG: bha:BH3985 transposase (13).
 
     0.575
Swol_0551
KEGG: mta:Moth_1535 hypothetical protein.
  
     0.570
Swol_0918
Hypothetical protein; KEGG: tte:TTE2548 small, acid-soluble spore proteins, alpha/be.
  
     0.549
Swol_0562
KEGG: mta:Moth_1522 protein of unknown function DUF322.
  
    0.540
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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