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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1911KEGG: dsy:DSY1712 hypothetical protein. (197 aa)    
Predicted Functional Partners:
Swol_1481
Glutaconate CoA-transferase; KEGG: gme:Gmet_1708 coenzyme A transferase.
  
     0.580
Swol_1743
KEGG: mba:Mbar_A3737 hypothetical protein.
  
     0.469
Swol_0793
Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: dsy:DSY1719 hypothetical protein.
  
     0.462
Swol_1148
KEGG: chy:CHY_0956 hypothetical protein.
  
     0.462
Swol_0676
KEGG: dsy:DSY2235 hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
     0.455
Swol_1052
KEGG: mta:Moth_0516 spore germination protein-like.
  
     0.443
Swol_1822
KEGG: dsy:DSY3098 putative formate dehydrogenase formation protein FdhE.
  
     0.436
Swol_2497
KEGG: syf:Synpcc7942_0443 hypothetical protein.
  
     0.418
Swol_1370
KEGG: dra:DRA0022 hypothetical protein.
  
     0.412
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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