STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1917KEGG: tte:TTE0067 hypothetical protein. (339 aa)    
Predicted Functional Partners:
Swol_1916
Glycosyltransferase; KEGG: tte:TTE0066 predicted glycosyltransferase.
   
 0.995
Swol_2025
KEGG: dps:DP2454 hypothetical protein.
 
     0.786
Swol_1919
KEGG: tma:TM1852 hypothetical protein.
 
     0.783
Swol_1900
KEGG: dps:DP2455 hypothetical protein.
  
   
 0.689
Swol_1915
KEGG: tte:TTE0731 phosphomannomutase.
     
 0.603
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
   
 
 0.532
Swol_0525
KEGG: sat:SYN_01761 pilin assembly protein.
  
     0.431
Swol_0159
KEGG: mba:Mbar_A2947 hypothetical protein.
  
     0.421
Swol_0854
KEGG: tte:TTE1437 hypothetical protein.
  
     0.420
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.414
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.