STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1927KEGG: son:SO3922 formate dehydrogenase, putative. (220 aa)    
Predicted Functional Partners:
Swol_0798
KEGG: sat:SYN_00604 formate dehydrogenase iron-sulfur subunit.
 
 0.987
Swol_1824
KEGG: dsy:DSY3100 formate dehydrogenase beta subunit.
 
 0.986
Swol_0800
KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing.
 
 0.984
Swol_0799
KEGG: chy:CHY_0793 formate dehydrogenase-O, major subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.982
Swol_1825
KEGG: dsy:DSY3101 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.981
Swol_1834
KEGG: mta:Moth_0721 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.968
Swol_0786
KEGG: sth:STH3295 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.931
Swol_0797
KEGG: dsy:DSY3099 formate dehydrogenase gamma subunit.
  
  
 
0.925
Swol_1823
KEGG: dsy:DSY3099 formate dehydrogenase gamma subunit.
  
  
 
0.923
Swol_1832
KEGG: mag:amb2921 Fe-S-cluster-containing hydrogenase components 2.
 
  
  0.916
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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