STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1938PAS/PAC domain-like protein; KEGG: mhu:Mhun_1420 multi-sensor signal transduction histidine kinase. (632 aa)    
Predicted Functional Partners:
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
 
0.870
Swol_2106
Signal transduction histidine kinase nitrogen specific-like protein; KEGG: gsu:GSU1529 sensory box histidine kinase/response regulator.
 
 0.808
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
 0.794
Swol_1937
Hypothetical protein.
       0.773
Swol_1328
PAS/PAC sensor hybrid histidine kinase; KEGG: dsy:DSY3378 hypothetical protein.
 
 0.766
Swol_1053
Sensor domain-like protein; KEGG: pca:Pcar_0290 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like.
   
 0.472
Swol_0600
Response regulator receiver modulated diguanylate cyclase; KEGG: gsu:GSU2313 response regulator.
 
 
 0.451
Swol_2131
KEGG: noc:Noc_2451 response regulator receiver.
 
 
 0.417
Swol_2132
KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase.
 
   
 0.413
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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