Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1963KEGG: mta:Moth_2145 hypothetical protein. (518 aa)    
Predicted Functional Partners:
Swol_1964
KEGG: dsy:DSY3858 hypothetical protein.
 
     0.791
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.770
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.769
Swol_0123
KEGG: mta:Moth_0215 polysaccharide pyruvyl transferase.
  
     0.752
Swol_2286
Hypothetical protein; KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase.
  
     0.741
Swol_0133
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.739
Swol_1965
KEGG: dsy:DSY3859 hypothetical protein.
 
     0.734
Swol_0382
KEGG: mta:Moth_1790 copper amine oxidase-like.
  
     0.714
Swol_1966
Hypothetical protein; KEGG: cac:CAC3279 possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats.
 
    
0.643
Swol_2497
KEGG: syf:Synpcc7942_0443 hypothetical protein.
  
     0.640
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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