Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1964KEGG: dsy:DSY3858 hypothetical protein. (105 aa)    
Predicted Functional Partners:
Swol_1965
KEGG: dsy:DSY3859 hypothetical protein.
 
    0.964
Swol_1966
Hypothetical protein; KEGG: cac:CAC3279 possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats.
 
     0.913
Swol_1963
KEGG: mta:Moth_2145 hypothetical protein.
 
     0.791
Swol_1967
Hypothetical protein; KEGG: mta:Moth_1160 metallophosphoesterase.
 
     0.747
Swol_1961
Hypothetical protein.
 
     0.733
Swol_1988
KEGG: sth:STH2256 hypothetical protein.
 
     0.581
Swol_1742
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.559
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.527
Swol_1990
KEGG: mac:MA3039 hypothetical protein.
 
     0.527
Swol_0298
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.521
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.