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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1967Hypothetical protein; KEGG: mta:Moth_1160 metallophosphoesterase. (1194 aa)    
Predicted Functional Partners:
Swol_1996
cAMP-binding protein; KEGG: ppu:PP3250 transporter, putative.
 
  
 0.764
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.762
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.761
Swol_1964
KEGG: dsy:DSY3858 hypothetical protein.
 
     0.748
Swol_1988
KEGG: sth:STH2256 hypothetical protein.
 
    0.744
Swol_1965
KEGG: dsy:DSY3859 hypothetical protein.
 
     0.735
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
 
     0.728
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.724
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.721
Swol_2500
Leucine-rich repeat (LRR) protein-like protein; KEGG: fra:Francci3_0044 serine/threonine protein kinase.
 
     0.717
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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