STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1969Hypothetical protein. (135 aa)    
Predicted Functional Partners:
Swol_1808
KEGG: ctc:CTC01468 hypothetical protein.
  
    0.474
Swol_1741
Hypothetical protein; KEGG: ana:alr7295 putative multidrug resistance protein.
  
     0.458
Swol_1806
CRISPR-associated protein, Cas5h family; KEGG: ctc:CTC01466 hypothetical protein.
  
     0.453
Swol_0188
KEGG: mta:Moth_0225 phosphoribosyltransferase.
   
    0.424
Swol_1807
KEGG: ctc:CTC01467 hypothetical protein.
  
     0.424
Swol_1745
Transposase-like protein; KEGG: tte:TTE2604 transposase.
  
     0.422
Swol_2238
Transposase-like protein; KEGG: tte:TTE2604 transposase.
  
     0.422
Swol_1809
KEGG: ctc:CTC01469 hypothetical protein.
  
     0.420
Swol_2248
KEGG: plt:Plut_1806 hypothetical protein.
 
  
 0.415
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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