Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swol_1971KEGG: dsy:DSY3673 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Swol_1972
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.949
Swol_0576
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.775
Swol_1410
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.763
Swol_0495
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.753
Swol_0577
Hypothetical protein.
  
     0.673
Swol_1411
KEGG: dsy:DSY3673 hypothetical protein.
  
     0.654
Swol_0496
KEGG: dsy:DSY2129 hypothetical protein.
  
     0.604
Swol_0151
KEGG: dsy:DSY2308 hypothetical protein.
  
     0.570
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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