Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1988KEGG: sth:STH2256 hypothetical protein. (554 aa)    
Predicted Functional Partners:
Swol_1990
KEGG: mac:MA3039 hypothetical protein.
 
     0.797
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.773
Swol_0298
KEGG: mta:Moth_0188 hypothetical protein.
 
     0.773
Swol_1742
KEGG: mta:Moth_0243 hypothetical protein.
 
     0.771
Swol_0141
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.765
Swol_0317
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.763
Swol_0293
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.762
Swol_2183
KEGG: mta:Moth_0656 hypothetical protein.
  
     0.762
Swol_1184
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.758
Swol_1924
KEGG: mta:Moth_0656 hypothetical protein.
  
     0.752
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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