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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2007ATPase (AAA+ superfamily)-like protein; KEGG: ttj:TTHA1014 hypothetical protein. (982 aa)    
Predicted Functional Partners:
Swol_2009
KEGG: ttj:TTHA1016 hypothetical protein.
 
     0.875
Swol_2010
KEGG: ttj:TTHA1020 hypothetical protein.
 
     0.865
Swol_2075
KEGG: ttj:TTHA1020 hypothetical protein.
 
     0.808
Swol_2006
KEGG: nha:Nham_1812 hypothetical protein.
 
     0.637
Swol_2526
Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)-like protein.
  
     0.596
Swol_2528
KEGG: vvy:VVA1541 hypothetical protein.
  
     0.538
Swol_2005
Hypothetical protein.
       0.525
Swol_2524
KEGG: vvy:VVA1536 hypothetical protein.
  
     0.517
Swol_1366
Hypothetical protein; KEGG: btk:BT9727_4065 probable methyltransferase.
  
    0.465
Swol_2008
KEGG: son:SO4263 hypothetical protein.
       0.461
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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