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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2013Secreted protein; Similar to catalytic domain of murein transglycosylase; KEGG: cac:CAC1100 secreted protein, similar to catalytic domain of murein transglycosylase. (187 aa)    
Predicted Functional Partners:
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.716
Swol_0193
Flagellin and related hook-associated proteins-like protein; KEGG: chy:CHY_0972 flagellar hook-associated protein 3; Belongs to the bacterial flagellin family.
  
 
 0.631
Swol_0862
CheC, inhibitor of MCP methylation; KEGG: dsy:DSY2981 hypothetical protein.
  
  
 0.614
Swol_2015
Integral membrane protein; Probably functions as a manganese efflux pump.
       0.613
Swol_0197
Flagellar capping protein-like protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.594
fliE
KEGG: gka:GK1218 flagellar hook-basal body protein.
  
  
 0.585
Swol_0852
Type III secretion system ATPase, FliI/YscN; KEGG: tte:TTE1439 flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.584
Swol_0858
KEGG: bbu:BB0283 flagellar hook protein.
  
  
 0.539
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.531
Swol_0861
KEGG: dsy:DSY2982 hypothetical protein.
  
    0.520
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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