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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2039KEGG: ctc:CTC00241 hypothetical membrane protein. (559 aa)    
Predicted Functional Partners:
Swol_2038
KEGG: ctc:CTC00240 ABC transporter ATP-binding protein.
 
    0.962
Swol_1721
Hypothetical protein; KEGG: ctc:CTC00761 membrane-associated protein.
  
     0.644
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
     0.579
Swol_2022
Hypothetical protein.
  
     0.568
Swol_1720
Hypothetical protein.
  
     0.565
Swol_2188
Hypothetical protein.
  
     0.554
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.549
Swol_2440
KEGG: ade:Adeh_3520 heat repeat protein.
  
     0.533
Swol_1996
cAMP-binding protein; KEGG: ppu:PP3250 transporter, putative.
 
     0.531
Swol_2018
Putative transmembrane anti-sigma factor.
  
     0.529
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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