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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2049KEGG: tte:TTE0400 uncharacterized membrane protein (homolog of Drosophila rhomboid). (222 aa)    
Predicted Functional Partners:
tatA
Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.730
tatA-2
Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.730
Swol_0126
KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase.
  
   0.709
Swol_0382
KEGG: mta:Moth_1790 copper amine oxidase-like.
  
   0.701
Swol_2295
N-acetylmuramoyl-L-alanine amidase-like protein; KEGG: bld:BLi00171 N-acetylmuramoyl-L-alanine amidase (germination); RBL01082.
  
   0.701
Swol_1864
KEGG: chy:CHY_0730 5-formyltetrahydrofolate cyclo-ligase family protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.572
Swol_1659
SPFH domain, Band 7 family protein; KEGG: bxe:Bxe_C0544 hypothetical protein.
   
 0.547
Swol_1863
SPFH domain, Band 7 family protein; KEGG: fnu:FN1549 stomatin like protein.
   
 0.547
Swol_2167
SPFH domain, Band 7 family protein; KEGG: dsy:DSY4504 hypothetical protein.
   
 0.547
Swol_2402
Hypothetical protein; KEGG: sat:SYN_00180 bacterial HflC protein.
   
 0.547
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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