STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2054KEGG: cpe:CPE1014 probable flavoprotein. (884 aa)    
Predicted Functional Partners:
Swol_1833
KEGG: pab:PAB1931 NADH oxidase.
 
 
0.973
Swol_2181
Peroxiredoxin-like protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
  
 0.867
Swol_2182
KEGG: aae:aq_486 alkyl hydroperoxide reductase.
  
  
 0.867
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
  
 0.861
Swol_2363
KEGG: cpe:CPE1014 probable flavoprotein.
 
  
0.841
Swol_0660
KEGG: tte:TTE1252 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.836
Swol_1892
KEGG: sth:STH1882 Fur family transcriptional regulator; Belongs to the Fur family.
  
  
 0.836
Swol_0670
Rubrerythrin; KEGG: pca:Pcar_2346 rubrerythrin.
 
  
0.758
Swol_1017
KEGG: mta:Moth_1717 iron hydrogenase, small subunit.
  
  
 0.750
Swol_1479
KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family.
 
   
 0.748
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.