STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2060KEGG: mhu:Mhun_0060 serine phosphatase. (678 aa)    
Predicted Functional Partners:
Swol_2062
KEGG: bha:BH1536 anti-sigma F factor antagonist (stage II sporulation protein AA); Belongs to the anti-sigma-factor antagonist family.
 
     0.878
Swol_1794
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: mag:amb3520 serine phosphatase RsbU, regulator of sigma subunit.
  
 0.877
Swol_1795
KEGG: plt:Plut_1039 anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
 
     0.787
Swol_1225
KEGG: mta:Moth_0912 serine/threonine protein kinase.
 
 
 0.774
Swol_2059
Gamma-glutamylcysteine synthetase-like protein; KEGG: smu:SMU.1999c hypothetical protein.
       0.773
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
 
 0.757
Swol_1796
Hypothetical protein; KEGG: mhu:Mhun_3235 anti-sigma-factor antagonist (STAS) domain protein.
 
     0.720
Swol_2061
Na+-driven multidrug efflux pump-like protein; KEGG: efa:EF0660 MATE efflux family protein.
       0.701
Swol_1997
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: pfo:Pfl_2556 GCN5-related N-acetyltransferase.
 
  
 0.694
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
  
 
 0.642
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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