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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2061Na+-driven multidrug efflux pump-like protein; KEGG: efa:EF0660 MATE efflux family protein. (560 aa)    
Predicted Functional Partners:
Swol_1820
Na+-driven multidrug efflux pump-like protein; KEGG: bha:BH2163 hypothetical protein.
  
     0.772
Swol_2059
Gamma-glutamylcysteine synthetase-like protein; KEGG: smu:SMU.1999c hypothetical protein.
       0.713
Swol_2060
KEGG: mhu:Mhun_0060 serine phosphatase.
       0.701
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.590
Swol_0272
KEGG: mta:Moth_0262 glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.549
Swol_1966
Hypothetical protein; KEGG: cac:CAC3279 possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats.
  
     0.508
Swol_2062
KEGG: bha:BH1536 anti-sigma F factor antagonist (stage II sporulation protein AA); Belongs to the anti-sigma-factor antagonist family.
  
    0.506
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
 
   
 0.499
Swol_0803
Hypothetical protein; KEGG: sav:SAV1998 repressor homolog.
 
  
 0.442
Swol_1843
Hypothetical protein.
  
     0.440
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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