STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2063KEGG: bca:BCE5566 hypothetical protein. (434 aa)    
Predicted Functional Partners:
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
    0.788
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
   
 0.776
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.774
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
     0.774
Swol_2064
KEGG: bcz:BCZK0793 alginate O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
       0.774
Swol_2188
Hypothetical protein.
  
     0.774
Swol_2440
KEGG: ade:Adeh_3520 heat repeat protein.
  
     0.773
Swol_1743
KEGG: mba:Mbar_A3737 hypothetical protein.
  
    0.772
Swol_1875
Hypothetical protein; KEGG: blo:BL1698 possible MarR-type transcriptional regulator.
  
   
 0.772
Swol_1843
Hypothetical protein.
  
     0.771
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.