STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2070Hypothetical protein; KEGG: rba:RB9664 inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane-associated protein containing vWFA domain. (776 aa)    
Predicted Functional Partners:
Swol_2071
Putative transcriptional regulator, MerR family; KEGG: nfa:nfa26140 putative transcriptional regulator.
 
     0.817
Swol_1226
KEGG: ade:Adeh_0733 serine/threonine phosphatase.
 
    0.445
Swol_2072
KEGG: ddi:DDB0168508 hypothetical protein.
       0.443
Swol_1718
KEGG: rba:RB9424 hypothetical protein.
 
   
 0.408
Swol_2067
ATPases of the AAA+ class-like protein; KEGG: rfr:Rfer_3235 AAA ATPase.
       0.407
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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