STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2082KEGG: mta:Moth_0820 lysine exporter protein (LysE/YggA). (246 aa)    
Predicted Functional Partners:
Swol_0130
KEGG: mta:Moth_2364 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.542
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.512
Swol_2080
Phosphoserine phosphatase; KEGG: ade:Adeh_1167 HAD-superfamily subfamily IB, PSPase-like.
  
    0.454
Swol_1672
KEGG: pca:Pcar_0150 hypothetical protein.
 
     0.452
Swol_2294
KEGG: mta:Moth_2295 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
 
     0.440
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
    0.419
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.