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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2088Hypothetical protein; KEGG: mta:Moth_1439 SirA-like; Belongs to the sulfur carrier protein TusA family. (69 aa)    
Predicted Functional Partners:
Swol_2089
KEGG: mta:Moth_1442 hypothetical protein.
 
  
 0.963
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
     0.485
Swol_0416
KEGG: fnu:FN1896 ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.472
Swol_1912
KEGG: tte:TTE2789 selenocysteine lyase.
 
 
 
 0.471
Swol_2087
Transcriptional regulator, ArsR family; KEGG: tte:TTE2468 predicted transcriptional regulator.
     
 0.456
Swol_0415
KEGG: fnu:FN1897 ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.455
Swol_1887
KEGG: mta:Moth_0124 SirA-like; Belongs to the sulfur carrier protein TusA family.
  
     0.442
Swol_0413
KEGG: fnu:FN1899 hypothetical lipoprotein.
 
   
 0.437
Swol_0518
KEGG: tde:TDE0239 glycine reductase complex protein GrdD.
  
     0.422
Swol_0410
KEGG: gsu:GSU2519 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative.
 
    0.420
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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