Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2089KEGG: mta:Moth_1442 hypothetical protein. (368 aa)    
Predicted Functional Partners:
Swol_2088
Hypothetical protein; KEGG: mta:Moth_1439 SirA-like; Belongs to the sulfur carrier protein TusA family.
 
  
 0.950
Swol_1887
KEGG: mta:Moth_0124 SirA-like; Belongs to the sulfur carrier protein TusA family.
 
  
 0.715
Swol_0518
KEGG: tde:TDE0239 glycine reductase complex protein GrdD.
  
     0.611
Swol_0412
KEGG: tde:TDE0389 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative.
 
    0.472
Swol_1912
KEGG: tte:TTE2789 selenocysteine lyase.
 
     0.469
Swol_2560
KEGG: chy:CHY_1802 selenocysteine-specific translation elongation factor.
 
   
 0.452
Swol_0427
KEGG: tde:TDE0392 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative.
 
    0.442
Swol_2087
Transcriptional regulator, ArsR family; KEGG: tte:TTE2468 predicted transcriptional regulator.
     
 0.439
Swol_0410
KEGG: gsu:GSU2519 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative.
 
    0.435
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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