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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2092Response regulator receiver protein; KEGG: tdn:Tmden_0645 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor. (459 aa)    
Predicted Functional Partners:
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
 
0.855
Swol_1041
KEGG: gsu:GSU1891 response regulator.
  
 0.846
Swol_0951
KEGG: chy:CHY_2047 DNA-binding response regulator.
 
 
  
 0.808
Swol_1321
HD-GYP domain-like protein; KEGG: rfr:Rfer_3391 putative PAS/PAC sensor protein.
 
 
 0.805
Swol_0348
KEGG: chy:CHY_1875 sensory box protein.
 
 
 0.794
Swol_1320
HD-GYP domain-like protein; KEGG: dvu:DVU2933 response regulator/sensory box/HDIG domain protein.
 
 0.786
Swol_2130
KEGG: mag:amb0553 response regulator.
  
 0.763
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
  
 0.753
Swol_1894
KEGG: cac:CAC0475 HD-GYP domain.
 
 
 0.741
Swol_2424
HD-GYP domain-like protein; KEGG: gsu:GSU1007 GAF domain/HD domain protein.
 
 0.738
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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