STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2110KEGG: mta:Moth_2499 ABC transporter related. (254 aa)    
Predicted Functional Partners:
Swol_2111
KEGG: gsu:GSU3393 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
Swol_2112
KEGG: gsu:GSU3394 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Swol_2554
KEGG: mta:Moth_2500 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Swol_2555
KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
Swol_2113
KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative.
 
 
 0.989
Swol_2556
KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein).
 
 
 0.989
Swol_2552
KEGG: gka:GK2976 branched-chain amino acid ABC transporter (ATP-binding protein).
 
 
0.975
Swol_2553
KEGG: mta:Moth_2499 ABC transporter related.
  
  
 
0.903
Swol_2109
KEGG: gsu:GSU3390 hypothetical protein.
     
 0.793
Swol_2449
ABC-type multidrug transport system permease component; KEGG: mta:Moth_1899 ABC-2.
 
      0.544
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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