STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2118KEGG: chy:CHY_1108 CAAX amino terminal protease family protein. (240 aa)    
Predicted Functional Partners:
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.698
Swol_1788
KEGG: plt:Plut_0880 protein of unknown function DUF181.
  
  
 0.665
Swol_2536
KEGG: dsy:DSY5032 hypothetical protein.
  
     0.608
Swol_0864
KEGG: dsy:DSY2979 hypothetical protein.
  
     0.577
Swol_2119
Hypothetical protein.
       0.567
Swol_2047
KEGG: mta:Moth_1895 alkylhydroperoxidase AhpD core.
 
    0.555
Swol_2117
KEGG: mta:Moth_0206 hypothetical protein.
       0.545
Swol_2417
KEGG: mta:Moth_2408 methicillin resistance protein.
  
    0.462
Swol_0555
KEGG: mta:Moth_1531 hypothetical protein.
  
     0.434
Swol_0441
KEGG: chy:CHY_1645 hypothetical protein.
  
     0.427
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.