STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2124KEGG: dsy:DSY4296 hypothetical protein. (428 aa)    
Predicted Functional Partners:
Swol_2123
KEGG: dsy:DSY0945 hypothetical protein.
 
 
 0.988
Swol_2122
KEGG: dsy:DSY4304 hypothetical protein.
 
 
 0.951
Swol_2121
KEGG: pai:PAE3587 electron transfer flavoprotein alpha subunit.
 
 
 0.936
Swol_0267
Electron transfer flavoprotein beta subunit-like protein; KEGG: sdy:SDY_0063 FixA.
 
 
 0.855
etfB
Electron transfer flavoprotein, beta subunit; Part of an electron transfer flavoprotein involved in syntrophic growth of S.wolfei with butyrate. Probably receives electrons from butyryl-CoA dehydrogenases, and transfers them to the membrane-bound quinone oxidoreductase Swol_0698. Belongs to the ETF beta-subunit/FixA family.
 
 
 0.834
Swol_0266
KEGG: dsy:DSY3797 hypothetical protein.
 
 
 0.752
etfA
Electron transfer flavoprotein, alpha subunit; Part of an electron transfer flavoprotein involved in syntrophic growth of S.wolfei with butyrate. Probably receives electrons from butyryl-CoA dehydrogenases, and transfers them to the membrane-bound quinone oxidoreductase Swol_0698. Belongs to the ETF alpha-subunit/FixB family.
 
 
 0.720
Swol_1353
Oxidoreductase; KEGG: ctc:CTC00417 oxidoreductase.
  
  
 0.489
Swol_2126
KEGG: sth:STH1571 acyl-CoA dehydrogenase, short-chain specific.
  
  
 0.489
Swol_0678
KEGG: mta:Moth_0096 4-hydroxybenzoate polyprenyltransferase, putative; Belongs to the UbiA prenyltransferase family.
  
  
 0.454
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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