STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2154KEGG: tte:TTE0731 phosphomannomutase. (449 aa)    
Predicted Functional Partners:
Swol_1914
Mannose-1-phosphate guanylyltransferase (GDP); KEGG: gme:Gmet_1104 nucleotidyl transferase.
 
 0.935
Swol_2137
KEGG: gvi:gll3084 mannose-1-phosphate guanyltransferase.
 
 
 0.934
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.924
Swol_0259
KEGG: tte:TTE0090 transcriptional regulator.
  
 
 0.916
Swol_0260
KEGG: mta:Moth_0610 bifunctional phosphoglucose/phosphomannose isomerase.
  
 
 0.914
Swol_0597
KEGG: mta:Moth_1504 NUDIX hydrolase.
  
  0.909
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
    
 0.908
Swol_0243
KEGG: mta:Moth_0236 transketolase-like.
    
 0.904
Swol_1915
KEGG: tte:TTE0731 phosphomannomutase.
  
  
 
0.902
Swol_0244
Transketolase subunit B; KEGG: cpe:CPE0297 transketolase C-terminal section.
    
  0.900
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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