STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2164Nitroreductase; KEGG: mta:Moth_1834 nitroreductase. (190 aa)    
Predicted Functional Partners:
Swol_1144
KEGG: pae:PA2893 acyl-CoA synthase.
 
 
 
 0.734
Swol_1180
KEGG: dsy:DSY4298 hypothetical protein.
   
 
 0.704
birA
Transcriptional repressor of the biotin operon / biotin acetyl-CoA-carboxylase synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.662
Swol_1788
KEGG: plt:Plut_0880 protein of unknown function DUF181.
  
  
 0.590
Swol_1724
KEGG: sth:STH2109 hypothetical protein.
   
 
 0.577
Swol_1442
Methionine synthase (B12-dependent); KEGG: pca:Pcar_2722 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation.
 
  
 0.562
Swol_2163
Hypothetical protein.
       0.536
Swol_0181
ABC-type multidrug transport system permease component; KEGG: mta:Moth_2330 ABC-2.
  
  
 0.528
Swol_0182
ABC-type multidrug transport system permease component; KEGG: mta:Moth_2331 ABC-2.
  
  
 0.528
Swol_2449
ABC-type multidrug transport system permease component; KEGG: mta:Moth_1899 ABC-2.
  
  
 0.528
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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