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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2177Response regulator receiver protein; KEGG: dsy:DSY1212 hypothetical protein. (223 aa)    
Predicted Functional Partners:
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
 
0.980
Swol_2176
KEGG: dsy:DSY3561 hypothetical protein.
 
 0.977
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
 0.975
Swol_1328
PAS/PAC sensor hybrid histidine kinase; KEGG: dsy:DSY3378 hypothetical protein.
 
0.948
Swol_2106
Signal transduction histidine kinase nitrogen specific-like protein; KEGG: gsu:GSU1529 sensory box histidine kinase/response regulator.
 
 0.948
Swol_1680
KEGG: det:DET1059 sensor histidine kinase.
 
 0.858
Swol_0952
KEGG: chy:CHY_2046 sensory box histidine kinase.
 
 0.853
Swol_2546
Signal transduction histidine kinase-like protein; KEGG: sat:SYN_01374 sensory transduction protein kinase.
 
 
 0.802
Swol_2132
KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase.
 
 0.737
Swol_0355
KEGG: pab:PAB1330 chemotaxis response regulator.
  
   
 0.716
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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