Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2178KEGG: oih:OB2513 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Swol_2179
KEGG: oih:OB2512 hypothetical protein.
 
    0.959
Swol_2180
KEGG: oih:OB2511 hypothetical protein.
 
     0.908
Swol_0343
Transmembrane sensor domain-like protein; KEGG: sat:SYN_01481 adenylate cyclase.
    
   0.648
Swol_0894
KEGG: chy:CHY_1773 MgtC family protein.
  
    0.597
Swol_0917
KEGG: lla:L63770 cation transport ATPase.
  
    0.597
Swol_1720
Hypothetical protein.
  
     0.456
Swol_2176
KEGG: dsy:DSY3561 hypothetical protein.
       0.453
Swol_0285
KEGG: mth:MTH932 hypothetical protein.
  
     0.432
Swol_2177
Response regulator receiver protein; KEGG: dsy:DSY1212 hypothetical protein.
       0.416
Swol_0250
Hypothetical protein; KEGG: mta:Moth_1766 ATPase.
  
     0.401
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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