Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swol_2181Peroxiredoxin-like protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (81 aa)    
Predicted Functional Partners:
Swol_2182
KEGG: aae:aq_486 alkyl hydroperoxide reductase.
     0.985
Swol_2054
KEGG: cpe:CPE1014 probable flavoprotein.
  
  
 0.857
Swol_1300
KEGG: ctc:CTC02552 thioredoxin reductase.
  
 
 0.749
Swol_2471
KEGG: chy:CHY_0906 thioredoxin-disulfide reductase.
  
 
 0.749
Swol_2040
KEGG: tte:TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.672
Swol_0462
Thioredoxin; KEGG: sth:STH2404 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.670
Swol_2010
KEGG: ttj:TTHA1020 hypothetical protein.
   
 0.668
Swol_2075
KEGG: ttj:TTHA1020 hypothetical protein.
   
 0.668
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 
 0.662
Swol_0455
KEGG: cpe:CPE2252 conserved hypothetical protein.
   
 
 0.644
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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