STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2185KEGG: aba:Acid345_1827 hypothetical protein. (214 aa)    
Predicted Functional Partners:
Swol_1186
KEGG: tma:TM0962 hypothetical protein.
  
  
 0.604
Swol_2188
Hypothetical protein.
  
     0.534
Swol_0209
Hypothetical protein; KEGG: hdu:HD1050 possible ubiquinone/menaquinone biosynthesis methyltransferase.
  
     0.492
Swol_0292
KEGG: dsy:DSY0166 hypothetical protein.
 
     0.485
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.452
Swol_2184
Trypsin-like serine protease; KEGG: oih:OB1100 hypothetical protein.
       0.452
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.435
Swol_2160
KEGG: cac:CAC2592 6-pyruvoyl-tetrahydropterin synthase related domain; conserved membrane protein.
  
     0.433
Swol_2022
Hypothetical protein.
  
    0.430
Swol_2056
KEGG: cpv:cgd6_3110 hypothetical protein.
  
    0.415
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.