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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2201KEGG: mta:Moth_2339 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Swol_1225
KEGG: mta:Moth_0912 serine/threonine protein kinase.
  
 
 0.911
Swol_2202
IS66 Orf2 like; KEGG: mta:Moth_2338 IS66 Orf2 like.
 
     0.911
Swol_2203
Transposase and inactivated derivatives-like protein; KEGG: mta:Moth_2336 transposase IS66.
 
     0.805
Swol_1228
Conserved hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.761
Swol_2282
IS66 Orf2 like; KEGG: mta:Moth_2338 IS66 Orf2 like.
 
     0.626
Swol_2210
IS66 Orf2 like; KEGG: mta:Moth_2338 IS66 Orf2 like.
 
     0.625
Swol_2281
Transposase and inactivated derivatives-like protein; KEGG: mta:Moth_2336 transposase IS66.
 
     0.577
Swol_2211
Transposase and inactivated derivatives-like protein; KEGG: mta:Moth_2336 transposase IS66.
 
     0.576
Swol_0820
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_0837 stage V sporulation protein D.
  
 
 0.555
Swol_2200
KEGG: dsy:DSY0817 hypothetical protein.
       0.551
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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