Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Swol_2201KEGG: mta:Moth_2339 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Swol_1225
KEGG: mta:Moth_0912 serine/threonine protein kinase.
  
 
 0.912
Swol_2202
IS66 Orf2 like; KEGG: mta:Moth_2338 IS66 Orf2 like.
 
     0.911
Swol_2203
Transposase and inactivated derivatives-like protein; KEGG: mta:Moth_2336 transposase IS66.
 
     0.805
Swol_1228
Conserved hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.745
Swol_2278
KEGG: tcr:511729.60 hypothetical protein Pfam: MORN PROSITE: GLY_RICH.
    
   0.662
Swol_0983
SpoVK; KEGG: bld:BLi01989 SpoVK.
  
 
 0.656
Swol_2067
ATPases of the AAA+ class-like protein; KEGG: rfr:Rfer_3235 AAA ATPase.
  
 
 0.656
Swol_1243
Hypothetical protein; KEGG: btk:BT9727_1206 PHA synthase subunit PhaR; regulator of PhaP.
   
 0.643
Swol_0189
KEGG: tte:TTE0491 flagellar protein.
   
  0.635
Swol_1503
YvyF; KEGG: bld:BLi03788 YvyF.
   
  0.635
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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