STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2207KEGG: ppr:PBPRA1799 hypothetical protein. (593 aa)    
Predicted Functional Partners:
Swol_2208
KEGG: dps:DP2375 hypothetical protein.
 
    
0.841
Swol_2212
Hypothetical protein; KEGG: pmu:PM0594 unknown.
  
     0.773
Swol_1966
Hypothetical protein; KEGG: cac:CAC3279 possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats.
  
     0.644
Swol_2220
KEGG: bfr:BF4241 IS21 family transposase.
  
     0.599
Swol_2210
IS66 Orf2 like; KEGG: mta:Moth_2338 IS66 Orf2 like.
  
    0.439
Swol_1465
KEGG: bcl:ABC1368 hypothetical protein.
  
     0.406
Swol_2209
KEGG: mta:Moth_2339 hypothetical protein.
       0.400
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.