STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2220KEGG: bfr:BF4241 IS21 family transposase. (189 aa)    
Predicted Functional Partners:
Swol_2217
KEGG: dsy:DSY0837 hypothetical protein.
 
     0.975
Swol_2216
DNA replication protein-like protein; KEGG: bfs:BF1535 insertion sequence IS21-like putative ATP-binding protein.
 
  
 0.746
Swol_2207
KEGG: ppr:PBPRA1799 hypothetical protein.
  
     0.599
Swol_2208
KEGG: dps:DP2375 hypothetical protein.
  
     0.591
Swol_1544
KEGG: sat:SYN_02742 hypothetical cytosolic protein.
  
     0.536
Swol_2215
KEGG: bca:BCE0419 DNA recombinase, putative.
  
     0.506
Swol_2212
Hypothetical protein; KEGG: pmu:PM0594 unknown.
  
     0.459
Swol_2422
KEGG: chy:CHY_1751 hypothetical protein.
  
     0.424
Swol_2221
Hypothetical protein.
       0.413
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.