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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2235KEGG: tko:TK1980 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit. (376 aa)    
Predicted Functional Partners:
Swol_1374
KEGG: ctc:CTC02525 pyruvate synthase subunit porB.
 0.999
Swol_2234
KEGG: pai:PAE3274 2-ketoacid ferredoxin oxidoreductase beta subunit.
 0.999
Swol_2236
KEGG: sai:Saci_2251 pyruvate synthase delta chain.
 
 0.998
Swol_2237
KEGG: mka:MK0080 pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
 0.995
Swol_1376
Pyruvate ferredoxin oxidoreductase, delta subunit; KEGG: ctc:CTC02527 pyruvate synthase subunit porD.
 
 0.991
Swol_1377
Pyruvate ferredoxin oxidoreductase, gamma subunit; KEGG: ctc:CTC02528 pyruvate synthase subunit porC.
 
 0.991
Swol_0037
KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
 
 0.942
Swol_1399
KEGG: chy:CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
  
 0.934
Swol_2040
KEGG: tte:TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.930
Swol_0558
KEGG: chy:CHY_1999 oxaloacetate decarboxylase, alpha subunit.
    
 0.926
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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