STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2239KEGG: chy:CHY_1799 hypothetical protein. (276 aa)    
Predicted Functional Partners:
Swol_2240
KEGG: stm:STM3832 putative permease.
  
    0.560
Swol_1677
Fe-S oxidoreductases-like protein; KEGG: chy:CHY_1211 radical SAM domain protein.
  
     0.453
Swol_0635
Hypothetical protein; KEGG: cpv:cgd5_2590 Alg5 like dolichyl-phosphate beta-glucosyltransferase.
  
     0.433
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
     0.433
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.431
Swol_1682
KEGG: chy:CHY_1866 hypothetical protein.
  
     0.428
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
    0.426
Swol_0292
KEGG: dsy:DSY0166 hypothetical protein.
  
     0.420
Swol_1252
KEGG: mta:Moth_1082 hypothetical protein.
  
     0.413
Swol_2188
Hypothetical protein.
  
     0.407
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.