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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2265KEGG: mta:Moth_0357 hypothetical protein. (263 aa)    
Predicted Functional Partners:
Swol_2267
KEGG: mta:Moth_1796 phage integrase; Belongs to the 'phage' integrase family.
 
     0.596
Swol_2264
KEGG: gsu:GSU2152 hypothetical protein.
       0.559
Swol_2263
KEGG: bha:BH3544 hypothetical protein.
       0.526
Swol_2266
Hypothetical protein.
       0.524
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
  
   
 0.467
Swol_0572
KEGG: noc:Noc_2743 hypothetical protein.
  
     0.464
Swol_2422
KEGG: chy:CHY_1751 hypothetical protein.
  
     0.460
Swol_0749
KEGG: mta:Moth_0681 hypothetical protein.
  
     0.409
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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