STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2276KEGG: cte:CT0332 hypothetical protein. (75 aa)    
Predicted Functional Partners:
Swol_2275
KEGG: ade:Adeh_2871 death-on-curing protein.
 
   
 0.932
Swol_1876
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.765
Swol_1879
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.765
Swol_2277
Hypothetical protein.
       0.532
Swol_1721
Hypothetical protein; KEGG: ctc:CTC00761 membrane-associated protein.
  
     0.495
Swol_2484
KEGG: pca:Pcar_2393 hypothetical protein.
  
     0.491
Swol_1720
Hypothetical protein.
  
   
 0.457
Swol_1810
Hypothetical protein.
  
     0.453
Swol_2497
KEGG: syf:Synpcc7942_0443 hypothetical protein.
  
    0.445
Swol_2485
KEGG: pca:Pcar_2393 hypothetical protein.
  
     0.410
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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