Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Swol_0440 | Swol_2270 | Swol_0440 | Swol_2270 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | Hypothetical protein. | 0.744 |
| Swol_0440 | arcB | Swol_0440 | Swol_2287 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.788 |
| Swol_0440 | argB | Swol_0440 | Swol_2289 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.874 |
| Swol_0440 | argC | Swol_0440 | Swol_2291 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.867 |
| Swol_0440 | argJ | Swol_0440 | Swol_2290 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.861 |
| Swol_0440 | argR | Swol_0440 | Swol_0585 | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.603 |
| Swol_2174 | argB | Swol_2174 | Swol_2289 | Acetyltransferase; KEGG: vvy:VVA1340 acetyltransferase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.922 |
| Swol_2174 | argJ | Swol_2174 | Swol_2290 | Acetyltransferase; KEGG: vvy:VVA1340 acetyltransferase. | N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.924 |
| Swol_2270 | Swol_0440 | Swol_2270 | Swol_0440 | Hypothetical protein. | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | 0.744 |
| Swol_2270 | arcB | Swol_2270 | Swol_2287 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.949 |
| Swol_2270 | argB | Swol_2270 | Swol_2289 | Hypothetical protein. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.957 |
| Swol_2270 | argC | Swol_2270 | Swol_2291 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.957 |
| Swol_2270 | argD | Swol_2270 | Swol_2288 | Hypothetical protein. | KEGG: mta:Moth_2287 acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.744 |
| Swol_2270 | argJ | Swol_2270 | Swol_2290 | Hypothetical protein. | N-acetylglutamate synthase / glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.833 |
| Swol_2270 | argR | Swol_2270 | Swol_0585 | Hypothetical protein. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.808 |
| Swol_2270 | carA | Swol_2270 | Swol_1282 | Hypothetical protein. | KEGG: ser:SERP0768 carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.517 |
| Swol_2270 | carB | Swol_2270 | Swol_1281 | Hypothetical protein. | KEGG: mta:Moth_0882 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.685 |
| arcB | Swol_0440 | Swol_2287 | Swol_0440 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase. | 0.788 |
| arcB | Swol_2270 | Swol_2287 | Swol_2270 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | Hypothetical protein. | 0.949 |
| arcB | argB | Swol_2287 | Swol_2289 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.989 |
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