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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2295N-acetylmuramoyl-L-alanine amidase-like protein; KEGG: bld:BLi00171 N-acetylmuramoyl-L-alanine amidase (germination); RBL01082. (259 aa)    
Predicted Functional Partners:
Swol_0126
KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase.
 
 
 
0.929
Swol_2049
KEGG: tte:TTE0400 uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
   0.701
Swol_1734
KEGG: sat:SYN_00202 hypothetical protein.
    
   0.681
Swol_2294
KEGG: mta:Moth_2295 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
       0.669
Swol_2376
KEGG: bat:BAS5136 stage II sporulation protein D.
  
 0.508
Swol_2296
KEGG: lma:LmjF30.3310 hypothetical protein, conserved.
       0.506
Swol_1257
Competence/damage-inducible protein cinA; KEGG: dsy:DSY1955 hypothetical protein; Belongs to the CinA family.
 
   
 0.500
Swol_2293
KEGG: tte:TTE1955 pyruvate-formate lyase-activating enzyme.
       0.451
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.435
Swol_2108
KEGG: mta:Moth_0087 sporulation protein and related proteins.
 
  
 0.434
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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