STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2301KEGG: cpe:CPE2373 probable ABC transporter. (289 aa)    
Predicted Functional Partners:
Swol_2300
KEGG: sth:STH3043 cobalt ABC transporter permease protein.
 0.996
Swol_1947
KEGG: sth:STH3043 cobalt ABC transporter permease protein.
 0.984
Swol_1950
ABC-type cobalt transport system permease component CbiQ and related transporters-like protein; KEGG: chy:CHY_2277 cobalt ABC transporter, permease protein.
 
 0.972
Swol_1045
KEGG: mta:Moth_1457 cobalt transport protein.
 
 0.967
ecfA
Putative ABC transporter; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.963
Swol_0108
KEGG: dsy:DSY4324 hypothetical protein.
 
 
 0.948
Swol_1951
KEGG: tko:TK0746 ABC-type cobalt transport system, ATPase component.
 
  
 
0.922
Swol_1948
KEGG: cac:CAC3101 ABC-type transporter, ATPase component (cobalt transporters subfamily).
  
  
 
0.915
Swol_1952
KEGG: mac:MA0870 ABC transporter, ATP-binding protein.
 
  
 
0.844
Swol_1949
KEGG: tte:TTE2261 ABC-type cobalt transport system, ATPase component.
 
  
 
0.840
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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