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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2402Hypothetical protein; KEGG: sat:SYN_00180 bacterial HflC protein. (210 aa)    
Predicted Functional Partners:
ftsH
FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
   
 0.848
Swol_1258
Vesicle-fusing ATPase; KEGG: tte:TTE0122 ATP-dependent Zn proteases; Belongs to the AAA ATPase family.
   
 0.847
Swol_2403
KEGG: chy:CHY_0804 MOSC domain protein.
       0.680
Swol_0910
KEGG: chy:CHY_1148 peptidase, M16 family; Belongs to the peptidase M16 family.
 
 0.620
Swol_2049
KEGG: tte:TTE0400 uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 0.547
Swol_1101
KEGG: tte:TTE1778 uridine kinase.
  
  0.478
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
 
 0.459
Swol_1442
Methionine synthase (B12-dependent); KEGG: pca:Pcar_2722 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation.
   
 0.433
Swol_1243
Hypothetical protein; KEGG: btk:BT9727_1206 PHA synthase subunit PhaR; regulator of PhaP.
   
  0.415
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
 
 
   0.411
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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