Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Swol_0590 | Swol_0952 | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | KEGG: chy:CHY_2046 sensory box histidine kinase. | 0.406 |
| Swol_0590 | Swol_1054 | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | 0.933 |
| Swol_0590 | Swol_1610 | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | KEGG: mta:Moth_0904 signal transduction histidine kinase regulating citrate/malate metabolism. | 0.900 |
| Swol_0590 | Swol_1918 | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | 0.922 |
| Swol_0590 | Swol_2412 | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.921 |
| Swol_0952 | Swol_0590 | KEGG: chy:CHY_2046 sensory box histidine kinase. | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.406 |
| Swol_0952 | Swol_1918 | KEGG: chy:CHY_2046 sensory box histidine kinase. | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | 0.450 |
| Swol_0952 | Swol_2132 | KEGG: chy:CHY_2046 sensory box histidine kinase. | KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase. | 0.496 |
| Swol_0952 | Swol_2176 | KEGG: chy:CHY_2046 sensory box histidine kinase. | KEGG: dsy:DSY3561 hypothetical protein. | 0.410 |
| Swol_0952 | Swol_2412 | KEGG: chy:CHY_2046 sensory box histidine kinase. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.766 |
| Swol_1054 | Swol_0590 | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.933 |
| Swol_1054 | Swol_1918 | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | 0.914 |
| Swol_1054 | Swol_2412 | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.975 |
| Swol_1543 | Swol_2412 | Putative transcriptional regulator, XRE family; KEGG: ctc:CTC00922 putative transcriptional regulator. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.693 |
| Swol_1610 | Swol_0590 | KEGG: mta:Moth_0904 signal transduction histidine kinase regulating citrate/malate metabolism. | Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.900 |
| Swol_1610 | Swol_2412 | KEGG: mta:Moth_0904 signal transduction histidine kinase regulating citrate/malate metabolism. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.900 |
| Swol_1680 | Swol_1918 | KEGG: det:DET1059 sensor histidine kinase. | PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein. | 0.491 |
| Swol_1680 | Swol_2132 | KEGG: det:DET1059 sensor histidine kinase. | KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase. | 0.518 |
| Swol_1680 | Swol_2176 | KEGG: det:DET1059 sensor histidine kinase. | KEGG: dsy:DSY3561 hypothetical protein. | 0.424 |
| Swol_1680 | Swol_2412 | KEGG: det:DET1059 sensor histidine kinase. | Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein. | 0.757 |
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