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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2415Signal peptide peptidase A. Serine peptidase. MEROPS family S49; KEGG: tte:TTE0850 Periplasmic serine proteases (ClpP class). (297 aa)    
Predicted Functional Partners:
Swol_2413
KEGG: sth:STH2791 hypothetical protein.
 
     0.838
Swol_2417
KEGG: mta:Moth_2408 methicillin resistance protein.
       0.799
Swol_2416
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.791
Swol_2414
Hypothetical protein.
       0.678
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.634
Swol_2412
Response regulator receiver protein; KEGG: dsy:DSY4941 hypothetical protein.
 
     0.532
Swol_1105
KEGG: sth:STH2899 DNA-dependent DNA polymerase family X.
 
     0.463
Swol_2419
KEGG: tma:TM0207 hypothetical protein.
       0.459
argS
KEGG: tte:TTE2533 arginyl-tRNA synthetase.
       0.446
Swol_2411
Fructose-bisphosphate aldolase; KEGG: dsy:DSY4939 hypothetical protein.
     
 0.436
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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