STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_2424HD-GYP domain-like protein; KEGG: gsu:GSU1007 GAF domain/HD domain protein. (400 aa)    
Predicted Functional Partners:
Swol_1668
KEGG: dsy:DSY3403 HD-GYP domain protein.
 
   
 0.777
Swol_0011
KEGG: mta:Moth_0689 putative PAS/PAC sensor protein.
 
 
0.743
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
 
 
 0.742
Swol_2483
Diguanylate cyclase with PAS/PAC sensor; KEGG: mta:Moth_0689 putative PAS/PAC sensor protein.
 
 
0.741
Swol_2092
Response regulator receiver protein; KEGG: tdn:Tmden_0645 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
 
 0.738
Swol_1328
PAS/PAC sensor hybrid histidine kinase; KEGG: dsy:DSY3378 hypothetical protein.
 
 
 0.725
Swol_0336
KEGG: gme:Gmet_2629 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 0.724
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
  
 0.706
Swol_2106
Signal transduction histidine kinase nitrogen specific-like protein; KEGG: gsu:GSU1529 sensory box histidine kinase/response regulator.
  
 
 0.682
Swol_2435
PAS/PAC domain-like protein; KEGG: sth:STH3300 two-component sensor histidine kinase.
 
 0.634
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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